I'd like to create a PDF representation of the panels that I make that show the frame of the panel and array/matrix of the PCB when submitting to board vendors. When I go to generate this PDF all I am able to see is the matrix/array grid and the lines fo

Thanks again for your question.  Typically some people will generate a Panel Outline layer and then output a PDF.  When the Panel is visible, go to menu:  Tools | Add Outline Layer..., select defaults, and press OK.  Then Print with the Panel outline layer visible.  Here's a quick video (on a sample panel),  

Note: In the next FAB3000 update, we'll add a Print Option to Include panel Outlines in the resulting PDF (similar to your drawing, without having to create an outline layer).

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